Protein ZmLIM2
ZmLIM2 is a protein in the LIM family.
Information
TF Name: ZmLIM2
Species: Maize
TF Family: LIM
Gene Name(Synonym): LIMTF2
Uniprot ID: C0P5I6
Subgenome: 1

Protein ZmLIM2

ZmLIM2 is a protein in the LIM family.

Overview of domains present in v5 transcripts
PF00412PF12315
Zm00001eb011970_T003
Zm00001eb011970_T001
Zm00001eb011970_T002
Zm00001eb011970_T004
Zm00001eb011970_T005
Zm00001eb011970_T006

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d028567DAPseq no logo sequence fimo position
Zm00001d028567DAPseq no logo sequence fimo position
Zm00001d028567ChIPseq no logo sequence fimo position
Zm00001d028567PChIPseq no logo sequence fimo position

Interactions where ZmLIM2 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmLIM2 is the target  
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There are 37 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb011970_T003 from maize genome v5

Amino Acid Sequence
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MSPRTERRSGLMKWLCRFLKGPKPGEPSRRRPQVAAGEGEGALWHQRPARPKIDPPRNENEELVDRAIAEPLAEAVKPPR
EKTHRGEDSNDDEDLTRAVQDSLNMNPYTPYNPYPPSQAQPIGHRVCGGCKHEIGRGHYLSCMGIYWHPQCFRCRSCGHL
IRETEFTLLGTDSYHKLCYKELHHPKCDVCLQFIPTNGSGLIEYRAHPFWGQKYCPSHERDRTPRCCSCEKMEPRNTKYM
SLGDGRGLCMECLGSAVMDTSECQPLYHSIRDYYEGMDMRLDQQIPVLLVERQALNEAMEGESKGPHHMPETRGLCLSEE
RTVSSILRRPRIGGNRLLGMRTRPQKLTRRCEVTAILVLYGLPRLLTGSILAHELMHGWLRLKGTCMDGQNISYTHLSSL
FMNFLEKIYIFPPKAQPDRTFHSGYRNLNAEVEEGICQVMSYLWLESEILPSSSRHAQPSSSSSSSSYPATSSEKGGISH
TGKKLGEFFMHQIANDTSTAYGDGFRTAYAAVNKYGLRQTLSHIRLTGGFPV

MSPRTERRSGLMKWLCRFLKGPKPGEPSRRRPQVAAGEGEGALWHQRPARPKIDPPRNENEELVDRAIAEPLAEAVKPPR
EKTHRGEDSNDDEDLTRAVQDSLNMNPYTPYNPYPPSQAQPIGHRVCGGCKHEIGRGHYLSCMGIYWHPQCFRCRSCGHL
IRETEFTLLGTDSYHKLCYKELHHPKCDVCLQFIPTNGSGLIEYRAHPFWGQKYCPSHERDRTPRCCSCEKMEPRNTKYM
SLGDGRGLCMECLGSAVMDTSECQPLYHSIRDYYEGMDMRLDQQIPVLLVERQALNEAMEGESKGPHHMPETRGLCLSEE
RTVSSILRRPRIGGNRLLGMRTRPQKLTRRCEVTAILVLYGLPRLLTGSILAHELMHGWLRLKGTCMDGQNISYTHLSSL
FMNFLEKIYIFPPKAQPDRTFHSGYRNLNAEVEEGICQVMSYLWLESEILPSSSRHAQPSSSSSSSSYPATSSEKGGISH
TGKKLGEFFMHQIANDTSTAYGDGFRTAYAAVNKYGLRQTLSHIRLTGGFPV

MSPRTERRSGLMKWLCRFLKGPKPGEPSRRRPQVAAGEGEGALWHQRPARPKIDPPRNENEELVDRAIAEPLAEAVKPPR
EKTHRGEDSNDDEDLTRAVQDSLNMNPYTPYNPYPPSQAQPIGHRVCGGCKHEIGRGHYLSCMGIYWHPQCFRCRSCGHL
IRETEFTLLGTDSYHKLCYKELHHPKCDVCLQFIPTNGSGLIEYRAHPFWGQKYCPSHERDRTPRCCSCEKMEPRNTKYM
SLGDGRGLCMECLGSAVMDTSECQPLYHSIRDYYEGMDMRLDQQIPVLLVERQALNEAMEGESKGPHHMPETRGLCLSEE
RTVSSILRRPRIGGNRLLGMRTRPQKLTRRCEVTAILVLYGLPRLLTGSILAHELMHGWLRLKGTCMDGQNISYTHLSSL
FMNFLEKIYIFPPKAQPDRTFHSGYRNLNAEVEEGICQVMSYLWLESEILPSSSRHAQPSSSSSSSSYPATSSEKGGISH
TGKKLGEFFMHQIANDTSTAYGDGFRTAYAAVNKYGLRQTLSHIRLTGGFPV

MSPRTERRSGLMKWLCRFLKGPKPGEPSRRRPQVAAGEGEGALWHQRPARPKIDPPRNENEELVDRAIAEPLAEAVKPPR
EKTHRGEDSNDDEDLTRAVQDSLNMNPYTPYNPYPPSQAQPIGHRVCGGCKHEIGRGHYLSCMGIYWHPQCFRCRSCGHL
IRETEFTLLGTDSYHKLCYKELHHPKCDVCLQFIPTNGSGLIEYRAHPFWGQKYCPSHERDRTPRCCSCEKMEPRNTKYM
SLGDGRGLCMECLGSAVMDTSECQPLYHSIRDYYEGMDMRLDQQIPVLLVERQALNEAMEGESKGPHHMPETRGLCLSEE
RTVSSILRRPRIGGNRLLGMRTRPQKLTRRCEVTAILVLYGLPRLLTGSILAHELMHGWLRLKGTCMDGQNISYTHLSSL
FMNFLEKIYIFPPKAQPDRTFHSGYRNLNAEVEEGICQVMSYLWLESEILPSSSRHAQPSSSSSSSSYPATSSEKGGISH
TGKKLGEFFMHQIANDTSTAYGDGFRTAYAAVNKYGLRQTLSHIRLTGGFPV

MSPRTERRSGLMKWLCRFLKGPKPGEPSRRRPQVAAGEGEGALWHQRPARPKIDPPRNENEELVDRAIAEPLAEAVKPPR
EKTHRGEDSNDDEDLTRAVQDSLNMNPYTPYNPYPPSQAQPIGHRVCGGCKHEIGRGHYLSCMGIYWHPQCFRCRSCGHL
IRETEFTLLGTDSYHKLCYKELHHPKCDVCLQFIPTNGSGLIEYRAHPFWGQKYCPSHERDRTPRCCSCEKMEPRNTKYM
SLGDGRGLCMECLGSAVMDTSECQPLYHSIRDYYEGMDMRLDQQIPVLLVERQALNEAMEGESKGPHHMPETRGLCLSEE
RTVSSILRRPRIGGNRLLGMRTRPQKLTRRCEVTAILVLYGLPRLLTGSILAHELMHGWLRLKGTCMDGQNISYTHLSSL
FMNFLEKIYIFPPKAQPDRTFHSGYRNLNAEVEEGICQVMSYLWLESEILPSSSRHAQPSSSSSSSSYPATSSEKGGISH
TGKKLGEFFMHQIANDTSTAYGDGFRTAYAAVNKYGLRQTLSHIRLTGGFPV

MSPRTERRSGLMKWLCRFLKGPKPGEPSRRRPQVAAGEGEGALWHQRPARPKIDPPRNENEELVDRAIAEPLAEAVKPPR
EKTHRGEDSNDDEDLTRAVQDSLNMNPYTPYNPYPPSQAQPIGHRVCGGCKHEIGRGHYLSCMGIYWHPQCFRCRSCGHL
IRETEFTLLGTDSYHKLCYKELHHPKCDVCLQFIPTNGSGLIEYRAHPFWGQKYCPSHERDRTPRCCSCEKMEPRNTKYM
SLGDGRGLCMECLGSAVMDTSECQPLYHSIRDYYEGMDMRLDQQIPVLLVERQALNEAMEGESKGPHHMPETRGLCLSEE
RTVSSILRRPRIGGNRLLGMRTRPQKLTRRCEVTAILVLYGLPRLLTGSILAHELMHGWLRLKGTCMDGQNISYTHLSSL
FMNFLEKIYIFPPKAQPDRTFHSGYRNLNAEVEEGICQVMSYLWLESEILPSSSRHAQPSSSSSSSSYPATSSEKGGISH
TGKKLGEFFMHQIANDTSTAYGDGFRTAYAAVNKYGLRQTLSHIRLTGGFPV

MSPRTERRSGLMKWLCRFLKGPKPGEPSRRRPQVAAGEGEGALWHQRPARPKIDPPRNENEELVDRAIAEPLAEAVKPPR
EKTHRGEDSNDDEDLTRAVQDSLNMNPYTPYNPYPPSQAQPIGHRVCGGCKHEIGRGHYLSCMGIYWHPQCFRCRSCGHL
IRETEFTLLGTDSYHKLCYKELHHPKCDVCLQFIPTNGSGLIEYRAHPFWGQKYCPSHERDRTPRCCSCEKMEPRNTKYM
SLGDGRGLCMECLGSAVMDTSECQPLYHSIRDYYEGMDMRLDQQIPVLLVERQALNEAMEGESKGPHHMPETRGLCLSEE
RTVSSILRRPRIGGNRLLGMRTRPQKLTRRCEVTAILVLYGLPRLLTGSILAHELMHGWLRLKGTCMDGQNISYTHLSSL
FMNFLEKIYIFPPKAQPDRTFHSGYRNLNAEVEEGICQVMSYLWLESEILPSSSRHAQPSSSSSSSSYPATSSEKGGISH
TGKKLGEFFMHQIANDTSTAYGDGFRTAYAAVNKYGLRQTLSHIRLTGGFPV

MSPRTERRSGLMKWLCRFLKGPKPGEPSRRRPQVAAGEGEGALWHQRPARPKIDPPRNENEELVDRAIAEPLAEAVKPPR
EKTHRGEDSNDDEDLTRAVQDSLNMNPYTPYNPYPPSQAQPIGHRVCGGCKHEIGRGHYLSCMGIYWHPQCFRCRSCGHL
IRETEFTLLGTDSYHKLCYKELHHPKCDVCLQFIPTNGSGLIEYRAHPFWGQKYCPSHERDRTPRCCSCEKMEPRNTKYM
SLGDGRGLCMECLGSAVMDTSECQPLYHSIRDYYEGMDMRLDQQIPVLLVERQALNEAMEGESKGPHHMPETRGLCLSEE
RTVSSILRRPRIGGNRLLGMRTRPQKLTRRCEVTAILVLYGLPRLLTGSILAHELMHGWLRLKGTCMDGQNISYTHLSSL
FMNFLEKIYIFPPKAQPDRTFHSGYRNLNAEVEEGICQVMSYLWLESEILPSSSRHAQPSSSSSSSSYPATSSEKGGISH
TGKKLGEFFMHQIANDTSTAYGDGFRTAYAAVNKYGLRQTLSHIRLTGGFPV

MSPRTERRSGLMKWLCRFLKGPKPGEPSRRRPQVAAGEGEGALWHQRPARPKIDPPRNENEELVDRAIAEPLAEAVKPPR
EKTHRGEDSNDDEDLTRAVQDSLNMNPYTPYNPYPPSQAQPIGHRVCGGCKHEIGRGHYLSCMGIYWHPQCFRCRSCGHL
IRETEFTLLGTDSYHKLCYKELHHPKCDVCLQFIPTNGSGLIEYRAHPFWGQKYCPSHERDRTPRCCSCEKMEPRNTKYM
SLGDGRGLCMECLGSAVMDTSECQPLYHSIRDYYEGMDMRLDQQIPVLLVERQALNEAMEGESKGPHHMPETRGLCLSEE
RTVSSILRRPRIGGNRLLGMRTRPQKLTRRCEVTAILVLYGLPRLLTGSILAHELMHGWLRLKGTCMDGQNISYTHLSSL
FMNFLEKIYIFPPKAQPDRTFHSGYRNLNAEVEEGICQVMSYLWLESEILPSSSRHAQPSSSSSSSSYPATSSEKGGISH
TGKKLGEFFMHQIANDTSTAYGDGFRTAYAAVNKYGLRQTLSHIRLTGGFPV

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00412
PF00412
PF00412
PF12315
PF12315
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Nucleotide Sequence
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GCTTTTCGGTTTTAGCCATGTCCGA...

GRMZM2G160198_T01 from maize genome v3


Related TFome: pUT4802

Amino Acid Sequence
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MSPRTERRSGLMKWLCRFLKGPKPGEPSRRRPQVAAGEGEGALWHQRPARPKIDPPRNENEELVDRAIAEPLAEAVKPPR
EKTHRGEDSNDDEDLTRAVQDSLNMNPYTPYNPYPPSQAQPIGHRVCGGCKHEIGRGHYLSCMGIYWHPQCFRCRSCGHL
IRETEFTLLGTDSYHKLCYKELHHPKCDVCLQFVRPRVLGKPERSALQTVINCIPTNGSGLIEYRAHPFWGQKYCPSHER
DRTPRCCSCEKMEVQPRNTKYMSLGDGRGLCMECLGSAVMDTSECQPLYHSIRDYYEGMDMRLDQQIPVLLVERQALNEA
MEGESKGPHHMPETRGLCLSEERTVSSILRRPRIGGNRLLGMRTRPQKLTRRCEVTAILVLYGLPRLLTGSILAHELMHG
WLRLKGYRNLNAEVEEGICQVMSYLWLESEILPSSSRHAQPSSSSSSSSYPATSSEKGGISHTGKKLGEFFMHQIANDTS
TAYGDGFRTAYAAVNKYGLRQTLSHIRLTGGFPV

Nucleotide Sequence
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AGCTCTTGCTTCTTCTCTTCCCCTC...

GRMZM2G160198_T02 from maize genome v3

Amino Acid Sequence
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MSPRTERRSGLMKWLCRFLKGPKPGEPSRRRPQVAAGEGEGALWHQRPARPKIDPPRNENEELVDRAIAEPLAEAVKPPR
EKTHRGEDSNDDEDLTRAVQDSLNMNPYTPYNPYPPSQAQPIGHRVCGGCKHEIGRGHYLSCMGIYWHPQCFRCRSCGHL
IRETEFTLLGTDSYHKLCYKELHHPKCDVCLQFIPTNGSGLIEYRAHPFWGQKYCPSHERDRTPRCCSCEKMEVQPRNTK
YMSLGDGRGLCMECLGSAVMDTSECQPLYHSIRDYYEGMDMRLDQQIPVLLVERQALNEAMEGESKGPHHMPETRGLCLS
EERTVSSILRRPRIGGNRLLGMRTRPQKLTRRCEVTAILVLYGLPRLLTGSILAHELMHGWLRLKGYRNLNAEVEEGICQ
VMSYLWLESEILPSSSRHAQPSSSSSSSSYPATSSEKGGISHTGKKLGEFFMHQIANDTSTAYGDGFRTAYAAVNKYGLR
QTLSHIRLTGGFPV

Nucleotide Sequence
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AGCTCTTGCTTCTTCTCTTCCCCTC...

Zm00001d028567_T001 from maize genome v4

Amino Acid Sequence
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MSPRTERRSGLMKWLCRFLKGPKPGEPSRRRPQVAAGEGEGALWHQRPARPKIDPPRNENEELVDRAIAEPLAEAVKPPR
EKTHRGEDSNDDEDLTRAVQDSLNMNPYTPYNPYPPSQAQPIGHRVCGGCKHEIGRGHYLSCMGIYWHPQCFRCRSCGHL
IRETEFTLLGTDSYHKLCYKELHHPKCDVCLQFVRPRVLGKPERSALQTVINCIPTNGSGLIEYRAHPFWGQKYCPSHER
DRTPRCCSCEKMEVQPRNTKYMSLGDGRGLCMECLGSAVMDTSECQPLYHSIRDYYEGMDMRLDQQIPVLLVERQALNEA
MEGESKGPHHMPETRGLCLSEERTVSSILRRPRIGGNRLLGMRTRPQKLTRRCEVTAILVLYGLPRLLTGSILAHELMHG
WLRLKGYRNLNAEVEEGICQVMSYLWLESEILPSSSRHAQPSSSSSSSSYPATSSEKGGISHTGKKLGEFFMHQIANDTS
TAYGDGFRTAYAAVNKYGLRQTLSHIRLTGGFPV

Nucleotide Sequence
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GTACTGTACATCGACATGCGACATC...

Zm00001eb011970_T001 from maize genome v5

Amino Acid Sequence
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MKWLCRFLKGPKPGEPSRRRPQVAAGEGEGALWHQRPARPKIDPPRNENEELVDRAIAEPLAEAVKPPREKTHRGEDSND
DEDLTRAVQDSLNMNPYTPYNPYPPSQAQPIGHRVCGGCKHEIGRGHYLSCMGIYWHPQCFRCRSCGHLIRETEFTLLGT
DSYHKLCYKELHHPKCDVCLQFIPTNGSGLIEYRAHPFWGQKYCPSHERDRTPRCCSCEKMEPRNTKYMSLGDGRGLCME
CLGSAVMDTSECQPLYHSIRDYYEGMDMRLDQQIPVLLVERQALNEAMEGESKGPHHMPETRGLCLSEERTVSSILRRPR
IGGNRLLGMRTRPQKLTRRCEVTAILVLYGLPRLLTGSILAHELMHGWLRLKGTCMDGQNISYTHLSSLFMNFLEKIYIF
PPKAQPDRTFHSGYRNLNAEVEEGICQVMSYLWLESEILPSSSRHAQPSSSSSSSSYPATSSEKGGISHTGKKLGEFFMH
QIANDTSTAYGDGFRTAYAAVNKYGLRQTLSHIRLTGGFPV

Nucleotide Sequence
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TCCCAATTAATACATCTCGCCCCTT...

Zm00001eb011970_T002 from maize genome v5

Amino Acid Sequence
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MKWLCRFLKGPKPGEPSRRRPQVAAGEGEGALWHQRPARPKIDPPRNENEELVDRAIAEPLAEAVKPPREKTHRGEDSND
DEDLTRAVQDSLNMNPYTPYNPYPPSQAQPIGHRVCGGCKHEIGRGHYLSCMGIYWHPQCFRCRSCGHLIRETEFTLLGT
DSYHKLCYKELHHPKCDVCLQFVRPRVLGKPERSALQTVINCIPTNGSGLIEYRAHPFWGQKYCPSHERDRTPRCCSCEK
MEVQPRNTKYMSLGDGRGLCMECLGSAVMDTSECQPLYHSIRDYYEGMDMRLDQQIPVLLVERQALNEAMEGESKGPHHM
PETRGLCLSEERTVSSILRRPRIGGNRLLGMRTRPQKLTRRCEVTAILVLYGLPRLLTGSILAHELMHGWLRLKGYRNLN
AEVEEGICQVMSYLWLESEILPSSSRHAQPSSSSSSSSYPATSSEKGGISHTGKKLGEFFMHQIANDTSTAYGDGFRTAY
AAVNKYGLRQTLSHIRLTGGFPV

Nucleotide Sequence
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TCCCAATTAATACATCTCGCCCCTT...

Zm00001eb011970_T004 from maize genome v5

Amino Acid Sequence
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MSPRTERRSGLMKWLCRFLKGPKPGEPSRRRPQVAAGEGEGALWHQRPARPKIDPPRNENEELVDRAIAEPLAEAVKPPR
EKTHRGEDSNDDEDLTRAVQDSLNMNPYTPYNPYPPSQAQPIGHRVCGGCKHEIGRGHYLSCMGIYWHPQCFRCRSCGHL
IRETEFTLLGTDSYHKLCYKELHHPKCDVCLQFIPTNGSGLIEYRAHPFWGQKYCPSHERDRTPRCCSCEKMEVQPRNTK
YMSLGDGRGLCMECLGSAVMDTSECQPLYHSIRDYYEGMDMRLDQQIPVLLVERQALNEAMEGESKGPHHMPETRGLCLS
EERTVSSILRRPRIGGNRLLGMRTRPQKLTRRCEVTAILVLYGLPRLLTGSILAHELMHGWLRLKGYRNLNAEVEEGICQ
VMSYLWLESEILPSSSRHAQPSSSSSSSSYPATSSEKGGISHTGKKLGEFFMHQIANDTSTAYGDGFRTAYAAVNKYGLR
QTLSHIRLTGGFPV

Nucleotide Sequence
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GCTTTTCGGTTTTAGCCATGTCCGA...

Zm00001eb011970_T005 from maize genome v5

Amino Acid Sequence
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MSPRTERRSGLMKWLCRFLKGPKPGEPSRRRPQVAAGEGEGALWHQRPARPKIDPPRNENEELVDRAIAEPLAEAVKPPR
EKTHRGEDSNDDEDLTRAVQDSLNMNPYTPYNPYPPSQAQPIGHRVCGGCKHEIGRGHYLSCMGIYWHPQCFRCRSCGHL
IRETEFTLLGTDSYHKLCYKELHHPKCDVCLQFVRPRVLGKPERSALQTVINCIPTNGSGLIEYRAHPFWGQKYCPSHER
DRTPRCCSCEKMEVQPRNTKYMSLGDGRGLCMECLGSAVMDTSECQPLYHSIRDYYEGMDMRLDQQIPVLLVERQALNEA
MEGESKGPHHMPETRGLCLSEERTVSSILRRPRIGGNRLLGMRTRPQKLTRRCEVTAILVLYGLPRLLTGSILAHELMHG
WLRLKGYRNLNAEVEEGICQVMSYLWLESEILPSSSRHAQPSSSSSSSSYPATSSEKGGISHTGKKLGEFFMHQIANDTS
TAYGDGFRTAYAAVNKYGLRQTLSHIRLTGGFPV

Nucleotide Sequence
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GTACTGTACATCGACATGCGACATC...

Zm00001eb011970_T006 from maize genome v5

Amino Acid Sequence
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MSPRTERRSGLMKWLCRFLKGPKPGEPSRRRPQVAAGEGEGALWHQRPARPKIDPPRNENEELVDRAIAEPLAEAVKPPR
EKTHRGEDSNDDEDLTRAVQDSLNMNPYTPYNPYPPSQAQPIGHRVCGGCKHEIGRGHYLSCMGIYWHPQCFRCRSCGHL
IRETEFTLLGTDSYHKLCYKELHHPKCDVCLQFVRPRVLGKPERSALQTVINCIPTNGSGLIEYRAHPFWGQKYCPSHER
DRTPRCCSCEKMEPRNTKYMSLGDGRGLCMECLGSAVMDTSECQPLYHSIRDYYEGMDMRLDQQIPVLLVERQALNEAME
GESKGPHHMPETRGLCLSEERTVSSILRRPRIGGNRLLGMRTRPQKLTRRCEVTAILVLYGLPRLLTGSILAHELMHGWL
RLKGYRNLNAEVEEGICQVMSYLWLESEILPSSSRHAQPSSSSSSSSYPATSSEKGGISHTGKKLGEFFMHQIANDTSTA
YGDGFRTAYAAVNKYGLRQTLSHIRLTGGFPV

Nucleotide Sequence
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GTACTGTACATCGACATGCGACATC...


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